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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1290067 chr6:112848040 A/G ZBTB24 chr6:109783797-109804440:- -1.05 -8.49 4.58E-16 Box Plot
BLCA rs1290067 chr6:112848040 A/G ZUFSP chr6:116956781-116989957:- -0.79 -6.87 2.59E-11 Box Plot
BLCA rs12903326 chr15:64058946 G/A VCX chrX:7810303-7812184:+ 0.34 6 4.65E-9 Box Plot
BLCA rs12905197 chr15:91534106 T/A LEPR chr1:65886335-66107242:+ 0.73 6.04 3.57E-9 Box Plot
BLCA rs12907238 chr15:63897949 A/C VCX chrX:7810303-7812184:+ 0.34 6.14 2.05E-9 Box Plot
BLCA rs12911192 chr15:91513674 T/C LEPR chr1:65886335-66107242:+ 0.71 6.1 2.64E-9 Box Plot
BLCA rs12912296 chr15:64050169 A/G VCX chrX:7810303-7812184:+ 0.35 6.03 3.88E-9 Box Plot
BLCA rs12913540 chr15:64036214 G/T VCX chrX:7810303-7812184:+ 0.36 6.28 9.44E-10 Box Plot
BLCA rs12920767 chr16:90094570 A/G VPS36 chr13:52986737-53024763:- -0.31 -6.39 4.86E-10 Box Plot
BLCA rs12922757 chr16:90093424 G/A VPS36 chr13:52986737-53024763:- -0.32 -6.29 8.48E-10 Box Plot
BLCA rs12925254 chr16:26359951 C/T C14orf138 chr14:50575350-50583297:- 0.38 6.19 1.58E-9 Box Plot
BLCA rs12925703 chr16:26360244 C/T C14orf138 chr14:50575350-50583297:- 0.38 6.33 6.74E-10 Box Plot
BLCA rs12925709 chr16:26360261 C/T C14orf138 chr14:50575350-50583297:- 0.38 6.33 6.74E-10 Box Plot
BLCA rs12926622 chr16:26369330 A/G C14orf138 chr14:50575350-50583297:- 0.37 6.03 3.9E-9 Box Plot
BLCA rs12926881 chr16:26369376 C/T C14orf138 chr14:50575350-50583297:- 0.37 6.18 1.66E-9 Box Plot